Proteomics MultiQC Analysis

🔍 Choose Analysis Type

Select how you want to analyze your proteomics data

📁 Upload Files

Upload your proteomics data files as ZIP archives (containing MaxQuant, DIANN, quantms, or mzIdentML data)

🔍 PRIDE Dataset Analysis

Analyze public PRIDE datasets by entering the accession number

View Examples

🔍 Check Job Status

Enter a job ID to check the status of a previous analysis or view completed results

Job IDs are provided when you start an analysis

⏳ Processing...

📁 File Upload

Starting processing...

About PMultiQC

pmultiqc is a MultiQC plugin for comprehensive quality control reporting of proteomics data. It generates interactive HTML reports with visualizations and metrics to help you assess the quality of your mass spectrometry-based proteomics experiments.

🌐 Project Website 📂 GitHub Repository 📊 Example Reports

Powered by PMultiQC - A comprehensive proteomics quality control framework